Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATD----TVNRYPDNGCVQLKAALARHLGP--D--FAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLT-DHTFDLYAMLATVT-DRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLP-PSQANFVWLPLGSRTQDFVEQAADARIVVRPYG-TDGVRVTVAAPEENDAFLRFARRWRSDQ |
| 3CQ5 Chain:A ((28-366)) | -------------------QLNVDIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAP--GIVIVDEAYAEFSPSPSATTLLE--KYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYAVVPSESNFVFFGDFS-DQHAAWQAFLDRGVLIRDVGIAGHLRTTIGVPEENDAFLDAAAEIIK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238487 for 2808 contacts (-84.9/contact) +
2D Compatibility (PS) -36179 + (NN) -17431 + (LL) 1728
1D Compatibility (HY) -18400 + (ID) 4600
Total energy: -313369.0 ( -111.60 by residue)
QMean score : 0.580
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