Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVFDSAYCNSP-LCAPSRFTLVSGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWA-VNWDEPEVRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRFAQEEQDPHSQRLLKVIDLWDKPLPEERIRAARRAYFGACSYVDAQIGALLATLEKCGLADDTIVVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPARFAPRRIGASVSTVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSGHDEVIGEYTAEGTLSPLMMIRRGDYKFIYSEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP |
| 2GSO Chain:A ((5-386)) | --TPHALLLISIDGLRADMLDRGI------TPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVEN---------TGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVR------------LDTRVDAVRGWLA---TDGAQRNRLVTLYF------------------------EHVDEAGHDHGPES-----------------------RQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQ------------------YGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDP--ALPSMRAVFLAQGPDLAQGKTLPGFD-----------NVDVYALMSRLLGIPAAP-NDGNPATLLPALRM------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143654 for 3422 contacts (-42.0/contact) +
2D Compatibility (PS) -39087 + (NN) -5479 + (LL) 7444
1D Compatibility (HY) -800 + (ID) 3600
Total energy: -185176.0 ( -54.11 by residue)
QMean score : 0.290
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