Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLG-QEGMMLFGAVIG-FMVAFSSGSLWLGVLLAVLAGMLLAALFAGVALYLNANQVACGLALTIFGVGLASFVGAAW---VGKPLQGFAPLALPVLGELP-LLGRMLFAQDALVYLSLALFAAVAWMLLRSRAGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYT---------------PMWAENMTAG----RGWIALALVVFASW------------RVLRVLLGAWLFGLASILHLVAQGV--GLSIPANLLAMLPYAATILVLVLLS-----RDALRTRLYAPVSLGQPWKAGH------------------------------------- |
4EEI Chain:A ((1-433)) | MIKRYDVAEISKIWADENKYAKMLEVELAILEALEDRMVPKGTAAEIRARAQIRPERVDEIEKVTKHDIIAFCTSIAEQFTAETGKFFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSGAVGNYCILTTEDEKKAADILGLPVEEVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDVFEVYEGFKKNPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVESFSKKLQKVMHDEHNIILDIPEMDFEGIKKTYLKEIDHVFDRSVKAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293481 for 2254 contacts (-130.2/contact) +
2D Compatibility (PS) -32437 + (NN) -16849 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 2350
Total energy: -348717.0 ( -154.71 by residue)
QMean score : 0.230
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