Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTA-STCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPE-QTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKER-DQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSETGVVEGASPFLVR |
| 3LXQ Chain:A ((83-412)) | -GKRKNLVILLQESLGAQFVGSLGGLPLTPNLDELMQEGWQFTQMYATGTRSVRGIEAVTTGFPPSPSRAVVKLS--------------KSQTGFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGNGFDQIVEEKN-----------YTNP---GF----------------VGSWGVSDEDLYNKADEEFERLSKGDKPFFSLVFTSSNHSPYEYPEGKIEQYD----------------------------------------------------SEHMTRNNAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDARV--------FGAN------------------------------------------LVPVKHFHIPALIIGKDIQ--PRKDDRIANNIDMPPTLLSLIGVDAK---------TPMIGRDLTKPLAREDE----R---AMMQYDKNFGYLTRDNLVVLSPG----EKVSTMEYDFESQTMKPLEVDESVIDRAKANALFASKAYQNNWYSSKR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155377 for 2883 contacts (-53.9/contact) +
2D Compatibility (PS) -34269 + (NN) -5623 + (LL) 10048
1D Compatibility (HY) -12800 + (ID) 3400
Total energy: -201421.0 ( -69.87 by residue)
QMean score : 0.541
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