Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR
3UC5 Chain:A ((1-157))
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN-
General information:
TITO was launched using:
RESULT:
Template:
3UC5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110233 for 1207 contacts (-91.3/contact) +
2D Compatibility (PS) -17149 + (NN) -9145 + (LL) -40
1D Compatibility (HY) -16400 + (ID) 3200
Total energy: -156167.0 ( -129.38 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3UC5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UC5-query.scw
PDB file :
Tito_Scwrl_3UC5.pdb
: