Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4B0C Chain:C ((2-169))
-TKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTIN--LVLAIADGTVSVDGREIYSAEGLRVGLFTSTD--
General information:
TITO was launched using:
RESULT:
Template:
4B0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126335 for 1307 contacts (-96.7/contact) +
2D Compatibility (PS) -17539 + (NN) -8512 + (LL) 384
1D Compatibility (HY) -24800 + (ID) 8300
Total energy: -185102.0 ( -141.62 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_4B0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B0C-query.scw
PDB file :
Tito_Scwrl_4B0C.pdb
: