Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAHTPSAPLAEVYDVAVVGGGINGVGIAADAAGRGLSVFLCEQHDLAQHTSSASSKLIHGGLRYLE-HYEFRLVREALAEREVLLAKAP-----HI-VKPLRFVLPHRP-HLRPAWMIRAGLFLYDHLGKREKLPASRGLRFTG---SSPLK-AEIRRGF-EYSDCAVDDARLVVLNAISAREHGAHVHTRTRCVSARRSKGLWHLHLERSDGSLYSIRARALVNAAGPWVARFIQDDLKQKSPYGIRLIQGSHIIVPKLYEGEHAYILQNEDRRIVFAIPYLDRFTMIGTTDREYQGDPAKVAISEEETAYLLQVVNAHFKQQLAAADILHSFAGVRPLCDDESDEPSAITRDYTLSLSAGNGEPPLLSVFG---GKLTTYRKLAESALTQLQPFFANLGPAWTAKAPLPGGEQMQSVEALTEQLANRYAWLDRELALRWARTYGTRVWRLLDGVNGEADLGEHLGGGLYAREVDYLCKHEWAQDAEDILWRRSKLGLFLSPSQQVRLGQYLQSEHPHRPRVHAA |
| 1RYI Chain:A ((14-362)) | ----------MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQL---------RQM---DDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTP---S--GDVWANHVVVASGVWSGMFFKQLG---LNNAFLPVKGECLSVWNDDIPLTKTLY----HDHCYIVPRKSGRLVVGATMKPGDW---SETPDLGGLESVMKKAKTMLP-AIQNMKVDRFWAGLRPGTKDGKP---------YIGRH--PEDSRILFAAGHFRNGILLAPATGALISDLIMNK---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195690 for 2866 contacts (-68.3/contact) +
2D Compatibility (PS) -35519 + (NN) -10735 + (LL) 11224
1D Compatibility (HY) -3200 + (ID) 2350
Total energy: -236270.0 ( -82.44 by residue)
QMean score : 0.471
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