Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIETRNLGKRFG----SRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASIFGFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLLEL-DEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELIRGLAQERIVIISTHILEEVSALCSRALVIG-GGRLLADSTPLELASRSRYHQAVTLYSDEPLDAVALAVLPGVAGIEENPAEGSLTVLAQPGAVIFPQVSGLVAERGWRIRELDVERGRLDEVFRNLTRGTEA |
| 2PJZ Chain:A ((1-261)) | MIQLKNVGITLSGKGYERFSLENINLEVN-GEKVIILGPNGSGKTTLLRAISGL-LPYSGNIFINGMEVRKIR-NYIRYSTNLPEAYE--IGVTVNDIVYLYEELKGL----DRDLFLEMLKALKLGEEILRRKLYKLSAGQSVLVRTSLALASQPEIVGLDEPFENVDAARRHVISRYIKEYGKEGILV--THELDMLNLYKEYKAYFLVGNRLQGPISVSELLESSIVEG------------------------ERNDALLVLDIMD-------KKVSIVKGDLGMKFGAL----GSLNRIYGII------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131497 for 2071 contacts (-63.5/contact) +
2D Compatibility (PS) -26607 + (NN) -3171 + (LL) 3548
1D Compatibility (HY) -20800 + (ID) 3500
Total energy: -182027.0 ( -87.89 by residue)
QMean score : 0.408
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