Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQQ-GEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPVALDASLLPHA------EDLLSLAGFAWAR-GEGVEAEQALPVYLRDNVATPKKAP
1OKJ Chain:A ((20-238))
GLRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEET----EAVLKPEIVHERMQQLSGEWVTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYL-----------
General information:
TITO was launched using:
RESULT:
Template:
1OKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148966 for 1838 contacts (-81.0/contact) +
2D Compatibility (PS) -22004 + (NN) -1658 + (LL) 940
1D Compatibility (HY) -12800 + (ID) 4200
Total energy: -188688.0 ( -102.66 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1OKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OKJ-query.scw
PDB file :
Tito_Scwrl_1OKJ.pdb
: