Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MALTNEDIINAVSEMSVMQVVELIKAMEEKFGVTAAAATVAAAGPAAAAAEEQTEFTIVLAEAGDKKVNVIKVVRELTGLGLKEAKAVVDGAPGVVKEGASKEEAEAAKKALEEAGA-KVELK-
1UQV Chain:A ((24-108))
GSHMNNEDFSQWSVDDVITWCISTLEVEETD--------------PLCQRLREND-----------------IVGDLLPELCLQDCQDLCDG---------DLNKAIKFKILINKMRDSKLEWKD
General information:
TITO was launched using:
RESULT:
Template:
1UQV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1392 for 504 contacts (2.8/contact) +
2D Compatibility (PS) -8837 + (NN) -3001 + (LL) 3280
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -10816.0 ( -21.46 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1UQV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UQV-query.scw
PDB file :
Tito_Scwrl_1UQV.pdb
: