Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSPHLERGG--LPIREVTRLTGVHPVTLRAWERRYGLVVPQRTGKGHRLYSEEQVERIRRILVWLERGVAISQVRALLERPEETPAADVESPWERLHEQLLDAIAALAERRLDDLFNQAASLYPVATLCEKLLQPLLQHLERRWQGQFGARMERAFFFSWLRSKLGARLYHQQRLQQGAPLLLVNQSELSLEPNLWLCSWLLGSGEVPLQVFDWPLPPAELALACERLEARGVLLYASHRLNPEHLPRLLAGVSCPVVLVGPAVEIQREAFETLALTGLLLASTPLEARRLLGERGLLNP |
4R4E Chain:A ((1-83)) | -MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEE-NGLIFPARTEGNRRLFSFHDVDKLLEIKHLIEQGVNMAGIKQILAKAEAE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40429 for 508 contacts (-79.6/contact) +
2D Compatibility (PS) -9168 + (NN) -4018 + (LL) 17800
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -44615.0 ( -87.82 by residue)
QMean score : 0.574
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