Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFVFAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGFRITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPL---------GTGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQVRLAQGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS |
2E2E Chain:A ((2-177)) | -------------------------------------------------------------------------------------KWQAVRAEYQRQRDPLHQFAEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE---NAELYAALATVLYYQASQHMT---AQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRIN-RTQLVESINMAKLLQRRSDLEHHHHHH----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2E2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 26450 for 1136 contacts (23.3/contact) +
2D Compatibility (PS) -17259 + (NN) -3876 + (LL) 5020
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: 2735.0 ( 2.41 by residue)
QMean score : 0.335
|
|
|