Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAESRPARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQRE--DTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGI--------DFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGD-------QQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAH---------LGSLEFAKKLLQDAKVSVSPGIGFGDY-----GDDHVRFALIENRDRLRQAVRGIKAMFRADGLLSPQRKVDSLAE |
| 1YIZ Chain:A ((17-428)) | ----------KRYQGSTKSVWVEYIQL-----AAQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215849 for 3307 contacts (-65.3/contact) +
2D Compatibility (PS) -42456 + (NN) -28940 + (LL) 2256
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -307789.0 ( -93.07 by residue)
QMean score : 0.569
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