Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPQPLADNL---SPPDPARLAQSIKDWGRELGFQQVGISDVELGEHEAHLQRWLEAGYHGEMDYMAAHGSKRSRPAELVPGTLRVISLRMDYLPGDTRMAQVLATPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSYFFLG--ELFVDMPLPVDPAMDSEHCGRCSACLDICPTAAFVGPYRLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCDDCQIVCPWNRFARPTGQGDFQPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLEALKARRGFPSELVREHVEWALRRHGET |
2NSY Chain:A ((1-271)) | SMQEKIMRELHVKPSIDPKQEIEDRVNFLKQY-VKKTGAKGFVLG-----ISGGQDSTLAGRLAQLAVESIREEG------GDAQFIAVRL--PHGTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQ------LTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLP---------------------LTGLTKRQGRTLLKEL------GAPERLYL---------------------KEPTADLLDEKPQQSDETELGISYDEIDDYLEGKEVSAKVSEALEKRYSMT------------------EHKRQVPASMFDDWWK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NSY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18047 for 2121 contacts (-8.5/contact) +
2D Compatibility (PS) -28064 + (NN) -10388 + (LL) 5036
1D Compatibility (HY) 1200 + (ID) 1850
Total energy: -52113.0 ( -24.57 by residue)
QMean score : 0.250
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