Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPLCPSPWLPLLIPAPAPGLTVQLLLSLLLLVPVHPQRLPRMQEDSPLGGGSSGEDDPLGEEDLPSEEDSPREEDPPGEEDLPGEEDLPGEEDLPEVKPKSEEEGSLKLEDLPTVEAPGDPQEPQNNAHRDKEGDDQSHWRYG---GDPPWPRVSP---ACA-GRFQSPVDIRPQLAAFCPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPP-GLEMALGPGREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLSTAFARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPGDSRLQLNFRATQPLNGRVIEASFPAGVDSSPRAAEPVQLNSCLAAGDILALVFGLLFAVTSVAFLVQMRRQHRRGTKGGVSYRPAEVAETGA |
1KOP Chain:A ((1-222)) | -----------------------------------------------------------------------------------------------------------------------------------------HTHWGYTGHDSPESWGNLSEEFRLCSTGKNQSPVNITET---VSGKLPAIKV-NYKPS---MVDVENNGHTIQVNYPEGGNTLTVN-GRTYTLKQFHFHV------PSENQIKGRTFPMEAHFVHLDE-----------NKQPLVLAVLYEAG-KTNGRLSSIWNVMPMTA--GKVKLNQPFDASTLLPKR-LKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVGS-------ENNRPVQPLNARVVI------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121062 for 1658 contacts (-73.0/contact) +
2D Compatibility (PS) -22773 + (NN) -8123 + (LL) 9644
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -160664.0 ( -96.90 by residue)
QMean score : 0.150
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