Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWYNNSAGPFLLTGFLGSEAVHYRISMSFFVIYFSVLFGNGTLLVLI-WNDHSLHEPMYYFLAMLADTDLGMTFTTMPTVLGVLLLDQREIAHAACFTQSFIHSLAIVESGILLVLAYDCFIAIRTPLRYNCILTNSRVMNIGLGVLMRG---FMSILPIILSLYCYPYCGSRALLHTF--------CLHQDVIKLACADITFNHIYPIIQTSLTVFLDALIIIF--SYILILKTVMGIASGQEEAKSLNTCVSHISCVLVFHITVMGLSFIHRFGKHAPHVVPITMSYVHFLFPPFVNPIIYSIKTKQIQRSII---RLFSGQSRA |
4LXU Chain:A ((1-273)) | ----GHMIKICIAG-------KNNIAVNSLQFILKNYFEADQIVVIPNKNDKGIDSWQKSLLKFALDNNI--KIVTLDEIYNI-------------------------EQIIFFSLEFDQIIKIEN-------FKSDRLFNIHFSALPKYKGVFTSITPIL-----NNELESGVTLHRIDNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNIQTIINNSYKDLKQTNINSSYFSRKDINLVHKINFKKTSFEIHNQIR--AFI--FQEYQLPIINNSKIIKSILANEFIGYNVFEEFENYFIISGIDGFKIIAQKLNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -334378 for 1986 contacts (-168.4/contact) +
2D Compatibility (PS) -26706 + (NN) -1480 + (LL) 4844
1D Compatibility (HY) -16400 + (ID) 2150
Total energy: -376270.0 ( -189.46 by residue)
QMean score : 0.205
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