Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGNGTILAVIKVEPSLHEPTYYFLSILALTDVSLSMSTLPSMLSIYWFNAPQIVFDACIMQMFFIHVF-GIVES-------GVLVSMAFDRFVAIRNPLHYVSILTHDVIRKTGIAVLTRAVCVVFPVPFLIKCLPFCHSNVLSHSYCLHQNMMRLACASTRINSLYGLIVVIFTLGLDVL---LTLLSYVLTLKTVLGIVSRGERLKTLSTCLSHMST---VLLFYVPFMGAASMIHRFWE--HLSPVVHMVMADIYLLLPPVLNP-----------------------IVYSV-----KTKQI---- |
4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIA-------DRVRTDAYRLGILRNWAALRGKTVLDV-------GAGTGILSIFCAQAGARRVYAVEASAI---WQQAREVVRFNGLEDR--VHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQMLEWRLGFWSQVKQHY--GVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293621 for 2108 contacts (-139.3/contact) +
2D Compatibility (PS) -29091 + (NN) 10592 + (LL) 1020
1D Compatibility (HY) -6400 + (ID) 3000
Total energy: -320500.0 ( -152.04 by residue)
QMean score : 0.163
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