Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLCSFLQISRNMHQENQTTITEFILLGLSNQAEHQNLLFVLFLSMYV---VTVVGNGLIIVAISLDIY------LHTPMYLFLAYLSF-----ADISSISNSV-PKMLVNIQTNSQSISYESCITQMYFSIVFVVTDNLLLGTMAFDHFVAICHPLNYTTFMRARFGTLLTVISWFLSNIIALTHTLLLIQLLFCDHNTLPHFFCDLAPLLKLSCSDTMINELVLFIVGLSVIIFPFVLIFFSYVCIIRAVLGVSSTQGKWKAFSTCGSHLTIALLFY-GTTVGVYFFPSSTHPEDTDKIGAVLFTV-VTPMMNPFIYSLRNKDMKGALRKLINRKISSL---- |
| 3TGH Chain:A ((1-339)) | -KCQLRFASLG---DWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYE-DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGDATNYPKWIMPNYWYHYFTHFTVSHKDLAAAFIFIDTWVL--------SSNFPYKKIHEKAWNDLKSQLSVAKKIADFIIVVGDQPIY---SSGYSRGSSYLAYYLLPLLKDA-------EVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKK--------GEVIYTHKLNIKKKKTLDKVNALQHFAALPNVELTDVPSSGPMG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -417482 for 2537 contacts (-164.6/contact) +
2D Compatibility (PS) -31480 + (NN) -4737 + (LL) 2088
1D Compatibility (HY) -1600 + (ID) 1800
Total energy: -455011.0 ( -179.35 by residue)
QMean score : 0.224
|
|
|