Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MEEAILLNQTSLVTYFRLRGLSVNHKARIAMF--SMFLIFYVLTLIGNVLIVITIIYDHRLHTPMYFFLSNLSFIDVCHST-----------VTVPKMLRDVWSEEKL---ISFDACVTQMFFLHLFACTEIFLLTVMAYDRY-----------VAICKPLQYMIVMNWKVCVLLAVALWTGGTIHSIALTSLTIKL-PY-CGPDEIDNFF-------------CDVPQVIKLACIDTPY-----VLEILIVSNSGLISVVCF---VVLVVSYAVILVSLRQQISKGKWKALSTCAAHLTVVTLFLGHCIFIYSRPSTSLPEDKAVSVFFTAVTPLLNPIIYTLRNEEMKSALNKLVGRKERKEEK- |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSN-QLALFHGTAVLQGYGIEITGAPDVLVDTT-GQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGM---TEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRNFSYTLERVG------DLNGTAYYDNGTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -284163 for 2146 contacts (-132.4/contact) +
2D Compatibility (PS) -32642 + (NN) 4845 + (LL) 1084
1D Compatibility (HY) -4000 + (ID) 2850
Total energy: -317726.0 ( -148.05 by residue)
QMean score : 0.171
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