Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKNYTSLTEFVLLGLADTLELQIILFLFF--------------LVIYTLTVLGNLGMILLIRIDSQLHTPMYF-----FLANLSFVDVCNSTTITPKM----LADLLSEKKTISFAGCFLQMYF----FISLATTECILFGLMAYDRY-AAICRPLLYSLIMS----RTVYLKMAAGAF--------AAGLLNFMVNTSHVSS-LSFCDSNVIH---HFFCDSPPLFKLSCSDTILKESISSILAGVNIVGTLLVILSSYSYVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYATCIYTYLRPSSSYSLNQDKVASVFYTVVIPMLNPLIYSLRSKEVKKALANVISRKRTSSFL---------- |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLT---LLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIH-SASDG--RVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKA---QRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236831 for 2187 contacts (-108.3/contact) +
2D Compatibility (PS) -32214 + (NN) 1306 + (LL) 1252
1D Compatibility (HY) -7600 + (ID) 3050
Total energy: -277137.0 ( -126.72 by residue)
QMean score : 0.168
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