Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPGNDTQISEFLLLGFSQEPGLQPFLFGLFLSMYLVTVLGN------LLI--------ILATISDSHLHTPMYFFLSNLSFADIC--VTSTTIPKMLMNIQTQNKVITYI-----------------ACLMQMYFF------ILFAG------FENFLLSVMAYDRFVAICHP--LHYMVIMNPHLCGLLVLASWTMSALY------SLLQILMVVRLSFCTALEIPHFFCELNQVIQLACSDSFLNHMVIYFTVALLGGGPLTGILYSYSKIISSIHAISSAQGKYKAFSTCASHLSVVSLFYGAILGVYLSSAATRNSHSSATASVMYTV--VTPMLNPFIY-SLRNKDIKRALGIHLLWGTMKGQFFKKCP--------------------------------- |
2CE7 Chain:A ((5-457)) | YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVP-FFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALL-GGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -279256 for 2237 contacts (-124.8/contact) +
2D Compatibility (PS) -32317 + (NN) 827 + (LL) 180
1D Compatibility (HY) -4000 + (ID) 2250
Total energy: -316816.0 ( -141.63 by residue)
QMean score : 0.145
|
|
|