Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHINCTQATEFILVGLTDHQELKMPLFVLFLSIYLFTVVGNLGLILLIRADTSLNTPMYFFLSNLAFVDFCYSSVITPKMLGNFLYKQNVISFDACATQLGCFLTFMVSESLLLASMAYDRYVAICNPLLYMVVMTPGICIQLVAVPYSYSFLMALFHTILTFRLSYCHSNIVNHFYCDDMPLLRLTCSDT---RFKQLWILACAGITFICSVLIVFVSYMFIIFAILRMSSAEGRRKAFSTCSSHMLAVTIFYGTLIFMYLQPSSSHSLDADKMASVFYTVIIPMLNPLIYSLRNKDVKDALKKVIINRNHAFIFLKLRK |
1DKZ Chain:A ((1-215)) | -----------------------VLLLDVTPLSLGIETMGG--VMTTLIAKNTTIPTKHSQVFST---------------------AEDN---------QSAVSIHVLQGERKRAAD----------NKSLGQFNLD-GINPAPRGMP-----------------------QIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN---------------EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAG---DKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199077 for 1543 contacts (-129.0/contact) +
2D Compatibility (PS) -22020 + (NN) 323 + (LL) 10184
1D Compatibility (HY) 6000 + (ID) 2000
Total energy: -206590.0 ( -133.89 by residue)
QMean score : 0.249
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