Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MRPHLSPPLQQLLLPVLLACAAHSTGALPRLCDVLQVLWEEQDQCLQELSREQTGDLGTEQPVPGCEGMWDNISCWPSSVPGRMVEVECPRFLRMLTSRNGSLFRNCTQD-GWSETFPRPN-----LACGVNVNDSSNEKRHSYLLKLKV------MYTVGYSSSLVMLLVALGILCAFRRLHCTRNYIHM-HLFVSFILRALSNFIKDAVLFSSDDVTYCDAHRAGCKLVMVLFQ--YCIMANYSWLLVEGLYLHTLLAISFFSERKYLQGFVAFGWGSPAIFVALWAIARHFLEDVGCWD-INANASIWWIIRGPVILSILINFILFINILRILMRKLRTQETRGNEVSHYKRLARSTLLLIPLFGIHYIVFAFSPEDAMEIQLFFELALGSFQGLVVAVLYCFLNGEVQLEVQKKWQQWHLREFPLHPVASFSNSTKASHLEQSQGTCRTSII |
| 4K5Y Chain:A ((13-423)) | HYHVAAIINYLGHCISLVALLVAFVLFLRARSIRCLRNIIHANLIAAFILRNATWFVVQLTMSPEVHQSN-VGWCRLVTAAYNYF---HVTNFFWMFGEGCYLHTAIVLTNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLSVAKSELDKAIGRNSNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRSALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVIATFRTGTW--DAYDRLRAWM--FICIGWGVPFPIIVAWAIGKLYYDNEKCWAGKRPGVYTDYIYQGPMALVLLINFIFLFNIVRILMTKLRASTT--SETIQARKAVKATLVLLPLLGITYM-LAFVNEVSRVVFIYFNAFLESFQGFFVSVFACFLNS----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233686 for 2814 contacts (-83.0/contact) +
2D Compatibility (PS) -39676 + (NN) -7448 + (LL) 3776
1D Compatibility (HY) -23600 + (ID) 4000
Total energy: -304634.0 ( -108.26 by residue)
QMean score : 0.226
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