Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPF--MQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLD-----ENMTVTDPEACYIGTEPWKPKEAVEE-NGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 4ITJ Chain:A ((10-288)) | --------------------------IKMKSSDFLE--------FGKVSLAFHRTQG----LMIMKTVYKGPNCI---EHNEALLEEAKMMNRLRHSRVVKLLGVII-EEGKYSLVMEYMEKGNLMHVLKAE-----MSTPLSVKGRIILEIIEGMAYLHGK-GVIHKDLKPENILVDND-FHIKIADLGLASFKMWSKLN-------------GTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFANKEPYENAIA----------E---QQLIMAIKSGNRPDVDDIT-EYCPREIISLMKLCWEANPEARPTFPGIEEKFRPFY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74174 for 1864 contacts (-39.8/contact) +
2D Compatibility (PS) -27238 + (NN) -20564 + (LL) 3636
1D Compatibility (HY) -14400 + (ID) 3050
Total energy: -135790.0 ( -72.85 by residue)
QMean score : 0.386
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