Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKITINSQECEVKPGLTIIQACETVGVEIPRFCYHERLAIAGNCRMCLVEVKGGPPKPVASCAMPVAEGMVIYTDTPKVKKAREGVLEFLLINHPLDCPICDQGGECDLQDITVVYGKGNSRFDEHKRAIPKKHFGQLIEAAMNRCIHCTRCIRFLSDVAGTNELGGIGRGENMEISTYIKKHISSELSGNIIDLCPVGALTSKPYSFTARPWELSHCETIDVLDAVGSSIRVDYRGP-------------------------------------------EVMRILPRLNEEVNEEWISDKTRFAYDG-LKV-----QRLDQPYIKRDNRLVPADWNEALTVAAKKLRS----TKPNKIAAIAG----DLADCESMLLLKEIMQ-KLGSSNIDCR-----QDGAKLIPNNRGSYVFNTTIEGIENVDLCLLINTNPKVEAPIIN--ARI---RK------------RYLQGNFPIASIGPD-IEYLYHV--------EKL-----GNNPGVLNEIAKGN--H-----------------------------------------KFCKLLSA------AQNPMLIIGQDALTRDDSES-ILALAGAIAEK-FNMVRNDWNGFNVLHKAAARVGGLDIGFVPKKDGKNINQILEQAESGEIEVVYLLGAD-EINT--------------------------------------LKLEN-AFVIYQGHHGDRGAHMADIILPGAAYTEKYATYVNTEGRVQRAKLAVSPPGEAKEDWSIIKNLSQYLGL---------------SLPYDSLFDVRKKLDAIGPQFRNTDQVVKNKWMSITCNEIKLSSVPFFLKECNFYMTDSISRASKIMANCTKAFYEHAS |
| 1G8K Chain:A ((4-606)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDRIT-------LPPANAQRTNMTCHFCIVGCGYHVYKWPELEEGGRAPEQNALGLDFRKQLPPLAVTLTPAMTNVVTEHDGARYDIMVVPDKACVVNSGLSSTRGGKMASYMYTPTGDGKERLSAPRLYAADEWVDTTWDHAMALYAGLIKKTLDKDGPQGVFFSCFDHGGAGGGFENTWGTGKLMFSAIQTPMVRIHNRPAYNSECHATREMGIGE-LNNAYEDAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQ-ARIIFVDPRETPSVAIARHVAGNDRVLHLAIEPGTDTALFNGLFTYVVEQGWIDKPFIEAHTKGFDDAVKTNRLSLDECSNITGVPVDMLKRAAEWSYKPKASGQAPRTMHAYEKGIIWGNDNYVIQSAL-LDLVIATHNVG-RRGTGCVRMGGHQEGYT--R-PPYP---GDKKIYIDQELIKGKGRIMTWWGCNNFQTSNNAQALREAILQRSAIVKQAMQKARGATTEEMVDVIYEATQNGGLFVTSINLYPTKLAEAAHLMLPAAHPGEMNLTSMNGERRIRLSEKFMDPPGTAMADCLIAARIANALRDMYQKDGKAEMAAQFEGFDWKTEEDAFNDGFRRAGQPGAPAIDSQGGSTGHLVTYDRLRKSGNNGVQLPVVSWDESKGLVGTEMLYTEGKFDTDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97971 for 3412 contacts (-28.7/contact) +
2D Compatibility (PS) -43346 + (NN) -21083 + (LL) 13124
1D Compatibility (HY) -2000 + (ID) 3050
Total energy: -154326.0 ( -45.23 by residue)
QMean score : 0.388
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