Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKIILQ---LLISIVII------FTLASAFV---FVVVCINKGKPERKDKLYEIDAAHSSWVQTIAYYLVKPILESALDRYIEKHGLIEYLKEIIQQKVEKGSINFYEIIEGSGSRAFCGQEVVLQMYKISDNLATPLPLPKQTSDVTLVI-------GQDNQREVGLGVIGMKE--GGERVVTINNIANKNEVNFNSYYIKLIEVKDKYPDSVNSMMIFNELINKTGKQVKCGDRVSVKYSLMGHDGEYIIKNQTVQFKVGNKKV--PLAMELGVIGMKEGNNRTIISPPELLNVTDDMLIENIDFD------EESVSIISLSLDDKQEIAAHHSTVE |
| 4NTC Chain:A ((2-326)) | MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKT------QHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEG-HSWYGRKVVL-ATGVRD---IPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVLALGPIANPARALHLARMALRLSESVTIYTNGNEQLAKEIQQAAEESPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLA-LNMTEGGD--ILTTPPFYETSVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135762 for 2326 contacts (-58.4/contact) +
2D Compatibility (PS) -30709 + (NN) -254 + (LL) 1616
1D Compatibility (HY) -6800 + (ID) 2400
Total energy: -174309.0 ( -74.94 by residue)
QMean score : 0.140
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