Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTIDFSDHTGLVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLTRD
1U6T Chain:A ((1-121))
VIRVYIASSSG--STAIKKKQQDVLGFLEAN-KIG------------FEEKDIAANEENRKWMRENVP---ENSRPATGYP--LPPQIFNE--------SQYRGDYDAFFEAREN----NAVYAFLGLTAPPGSKEAEVQAKQQALEHHHHHH--
General information:
TITO was launched using:
RESULT:
Template:
1U6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3268 for 801 contacts (-4.1/contact) +
2D Compatibility (PS) -12750 + (NN) -1449 + (LL) 3360
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -19507.0 ( -24.35 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1U6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6T-query.scw
PDB file :
Tito_Scwrl_1U6T.pdb
: