Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVEVEHQRQGVDLIKIDN-DETKIIFTNYGARVVSWKYHDNNIVLGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHGLDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVASEDTLFSPMNHVYFNLNRDN-NVVDNHRISSNQLDMYVLD-ERNIVTGDILDLHEV-FEDNKIK-LSDIFTSQHAQLSQQMTRFGGLDHPFTVGE-------HKMYVENHEFMLEVDTDMPHVVFFTFNQPDEWDS-PFNIYKPHSGFTLETQFLPNDINLYGEKAPSILKAGEVFNSKTSFRIEEKVEND |
| 1NSX Chain:A ((3-340)) | --IKIRDFGLGSDLISLTNKAGVTISFTNLGARIVDWQKDGKHLILGFD-SAKEYLEK-DAYPGATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAISDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQ---LV-KGIDHPFLLDQLGLDKEQARLTLD--DTSISVFTDQPSIVIFTANFGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELG-DISLKAGEKYQATTIYSLHTKL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111652 for 2809 contacts (-39.7/contact) +
2D Compatibility (PS) -35240 + (NN) -9865 + (LL) 1160
1D Compatibility (HY) -19200 + (ID) 5450
Total energy: -180247.0 ( -64.17 by residue)
QMean score : 0.431
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