Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNAVVVRKSASNVSYKVEKVDESHLSKGDVLVKVVYSSINYKDMLALQYKGGVIRDYPMIPGIDFAGIVESSS--NDKFKEGDNVLVTGY----------------------DVGVTHTGGFSEYAQVPGEWIVPIPQEMSIKESMVYGTAGFTAALSIFELEKYGMNIKSQPEILVSGATGGVGSVAIQILHKIGYENITAIVRKEKQIEIAKKLGAKQVIIIEDD-----NKPLKKGIFDYFLDTVGSNVTLYGLKRLNYQGVATVCGNVAGNSLNANILPFILRGIKLIGIDSVYVDHNIREDIWSKLA-NEWNIGNSLLYNEIGFEEFYKTIDQLLKGQHLGRTILKV |
| 3S2E Chain:A ((2-338)) | MMKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVT-D----TRPGQWVVISGI-GGLGHVAVQYARAMGLR-VAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGITIRGSIV--GTRSDLQESLDFAAHGDV----KATVSTAKLDDVNDVFGRLREGKVEGRVVLDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197877 for 2774 contacts (-71.3/contact) +
2D Compatibility (PS) -32971 + (NN) -7271 + (LL) 416
1D Compatibility (HY) -9600 + (ID) 3350
Total energy: -250653.0 ( -90.36 by residue)
QMean score : 0.464
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