Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLETITLAHIYEEQGFFEEALQIYTNILKKTPDNTEA--------------LKQMKRLEKIQKNCAPFKHDALLKQHYLNFI-KGDRLS-VENLEKWLVEWN
3UPV Chain:A ((8-100))
-----RLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAY-IRKATAQIAVKEYASALETLDAARTKDA
General information:
TITO was launched using:
RESULT:
Template:
3UPV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2525 for 465 contacts (5.4/contact) +
2D Compatibility (PS) -8763 + (NN) -10448 + (LL) 708
1D Compatibility (HY) 1200 + (ID) 600
Total energy: -15378.0 ( -33.07 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3UPV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UPV-query.scw
PDB file :
Tito_Scwrl_3UPV.pdb
: