Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNLKERCFTDNELNDNFVGIRSINNDLQICFPLGFDISDNKNIRADVKKLVSILLEYNKTIACENLLNNKNEIINSNFPLTAYKNVIEYFLSHGYYSENKSYYENNAKGRINFSKTIKKNRPIIQTFNNKNSFVYTRFQVKRKMINENELITAINKYCVHEAFSKFGFVFSSFMP-PKFNLPTDKNYCIYLLENKLNNTFNDDKKILFQSMKNILLQDDNILDKTDFKFGTHHFYVVWERMIDRAFGIKNKEVYFPKTKWNLRCSNQNPDYLLQPDSIMLFDDKIYILDAKYYKYGISGVASDLPNSASIIKQIVYGEYAAKLETKKEVYNIFLMPFNRFNNPLKLGNIFENIGFANGEWRDNLKQYENIQGILIDTKFLMQNYNKKSNDLLKLLAKNVEETKNNF |
1LGR Chain:E ((221-286)) | --------------------------------------------------------------------------------------------------------------------------------------VATRFNTMTKKADEIQ----IYKYVVHNVAHRFGKT-ATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1906 for 268 contacts (-7.1/contact) +
2D Compatibility (PS) -6972 + (NN) -2015 + (LL) 11276
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -1617.0 ( -6.03 by residue)
QMean score : 0.152
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