Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKVQ-RIQAIENLIHEKGSISLD-----DLCEQFNVS----KNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRPFENRDTENHLEKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTDKEITIITNSLDVINFASEMDNVK--------LIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVMNSDILEYEIKRHMME--KATAKFLLVDHTKVDKSALLTYGELAEFDWLV---------TSKDIAGGCLG----------YCEDVGVLVRLV |
| 4PHR Chain:A ((1-277)) | SEFELMKRLSEIKVLPILESLKYIKHNHASVVRFGDGEIDLMTGHSIPYQDYNEKLAKRLQQILQTKSDEKLLVCLPDVFSNMDRY----NQNARHFWERHFLKY------SEFYLNCCDAPFYGSTFIS--------RPYIDLIDKSPSEAYFESLKELWRGKDLLIVEGAT------SRSGVGNDLFVAASSIKRLVCPSKNAFQYYDEILRLTEKNAKNRLILVMLGPTAKVLVADLTTKGYQAIDLGHIDSEYEWYEMGATYKVKLTNKHTAEFNYDEGIELEFSQEYQEQIVARIG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62669 for 1772 contacts (-35.4/contact) +
2D Compatibility (PS) -23770 + (NN) -1527 + (LL) 1928
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -96288.0 ( -54.34 by residue)
QMean score : 0.262
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