Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSEMMLVTGGARSGKSSFAER-EAAKYDRVLYVATGIAF--EKDTEFQARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVT-----NLFFTLLGERELTNEIADEV-------EAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIGRVNQQIATQVEEVYLVVSGIPKRWK------------------------------------------------- |
| 4MUB Chain:A ((1-259)) | GAMIESSTTIQVISAGLPRTGTKSLKNALEIIYHKPCYHMFEIIFNKQSDIIKWQNLIHDSHMITTLTTKTIAIYDKLKELLDGYIATTDLPTCGFYKDLMNIYPNAKVLLTIRDKYDWLHSLRKVVLPKSNDPWKLKIEEGDKVLGLNSDFYKLTEDSLKFAFQKDDLNFDDDQVLLECYDEYNRLVQETVPSDRLLVLRLGDGWEPLCKFLNVEIPNGIDYPCVNSHHQMTQLTEQLIKYKSLDAIIHMFPDLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60625 for 1334 contacts (-45.4/contact) +
2D Compatibility (PS) -19466 + (NN) -953 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -88594.0 ( -66.41 by residue)
QMean score : 0.315
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