Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSE-FG---D-------KNEKLLHKVENLNPDVIAITGDLFDRQGDS-V----PKELIKKLT-KIAPVYFSPGNHEYDVKNAYEDDYKPFLEKMGV-VNLED-------KTATI-DVG---------GQKFQMSGLRSSANLDYDYSYYKKGLAEI-QTQQ--D-SQYYQVLLSHMPDYFKL-----------Y--VENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK |
1II7 Chain:A ((1-214)) | -------------------------------------------MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGP---SVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAW---------FEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGHIHKRYETS------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1II7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25136 for 1131 contacts (-22.2/contact) +
2D Compatibility (PS) -17457 + (NN) -9085 + (LL) 8448
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -49580.0 ( -43.84 by residue)
QMean score : 0.378
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