Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLEFSSDSETVFYMQRYKANTTEEAQMVLANVCMKSPLGIYAMIETESNKMIGIIELEIRD-EFSAEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGELRHLAKNPKGEWKTRAYYSILKEEYFNKVNTK
3FBU Chain:A ((2-168))
---------------FIKAERLLIRKFEFKDWEAVHEYTSDSDVMKY-IPEGVFTEEDTRNFVNKNM-G--AKNFPVILIGENILVGHIVFHKYFGEHTYEIGWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYFKKC-IPHGNEWWDEYYYAILEEE--------
General information:
TITO was launched using:
RESULT:
Template:
3FBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80721 for 1229 contacts (-65.7/contact) +
2D Compatibility (PS) -17231 + (NN) -1723 + (LL) 2256
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -111369.0 ( -90.62 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_3FBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBU-query.scw
PDB file :
Tito_Scwrl_3FBU.pdb
: