Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDVSSSPNITFMLQYTEANPQYVDYTNREEAVKIDEELSLETNRQMIEGLTEDELTRIQEAVPET-QLNFREYIDYMNRSYATEEQS-KELTAIFTQEADYLQKLRLIDLK-NKLESAYQNGSLLWQGVISFDNAFLAEQGLYDVATGQVDQKAIKAVMRDMMPTLIQKEGLS---DSAFWWGNIHLNTDNIHIHFGLSEVESNREKIFYQPRGRMEYKGNFSQKTINRFKSGVYHGLLKEETRSNLLRKEQILANLKADFIT-SIYQKDKITSSAEKNFLEQAYNHLPLNKKWRYGSNARDFAVSKFFL---DRYLDSYLNNEGSAAYQEFLKETRDFLQTYEGVYSAEKNKIYEKL-RKVDGQTIRTLAESKGYDLE---HHLARRVMDLRERLANNILRSFREAAPQIQDVQLEKNLESFSVLN-QKKILEQHPEASVVKSQKAWQKLGY-FVK-AGEQPLEIIRPVYKSYDKHGKGIGRPEFVSDTVYD--ISQLTENIQLKSLTLKDLSLF--SSNELKELV-------DAAKLKTNPT-ERERRELGTYRYALKLSILE------SSQKELQVRQKLLEQVQPLASDQPFLDFKKQLIAQELQA----IALQLTPNYKLSEDDKALKNRLKRQFEDSVALPVSKATPGAIQLPIRQLWTELGLVHHIQDENILTLLKGTSTTKQAYIEELQTHISIFQLKYQINNRNKQISQLSDEATIKEMRIANAKGFSELKRLYDTLQPSDDGQNQISQAVSKQLQERKVIKKAQLQQTQRSGKINTDFMRQLTASLNRSQQASKKALMERARSDEREEQEERRQAQR |
4C0E Chain:A ((9-528)) | --------------------------------------------------------LEAAHLLEQMEYVFDEWIHLCNNPHATERAAMI-----------FVHQLHSVQLVTNRDEFLLFLRHALDKSVERFEQGIHSG------ASIAESFQAVEALVKLIIIFVKSHSAAVAFMDSILALGVLVANSHHVK------------------------RGENFNQRVFYRFFALLLHEVGLLAGHFSKSHYEQIILNFAARLFDMRP-------------------------------NLLPGFACAWAGLVSHRAFLPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTVSSLGKEMYHAALKILIVLQHDFPIYLDKFRVQLCQSLPLHATQLVNLILAAIPPNCNSLAD-PFQAGLKVDKIPDMKERPPTAFDSAGLLREAGLLDILERMLQNGPSEDGVAQINHAINKSTSFGY---VPLGVNRRLIDAVVARFAEFAINRASSRSDSAIFVAGANDIKTLQMLVTEVSPEARYYLVSSMVNELRYPNAYTNYFSQALLDIFGHDMSDPEENLVREQIVRVLLERVLGYWPQPWGLIITILELLKNDKYLFFEL-PFIKATPEVAERFTALARSAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 32755 for 3363 contacts (9.7/contact) +
2D Compatibility (PS) -49663 + (NN) -20637 + (LL) 24132
1D Compatibility (HY) -19200 + (ID) 4100
Total energy: -36713.0 ( -10.92 by residue)
QMean score : 0.281
|
|
|