Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKFTQEEKEWFMTEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRVEVETGILEDQCAKIMQDFFRKGRQRKKEAKLSEKTKI
1Z3A Chain:A ((4-158))
---EVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIK----------
General information:
TITO was launched using:
RESULT:
Template:
1Z3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95445 for 1313 contacts (-72.7/contact) +
2D Compatibility (PS) -16667 + (NN) -5615 + (LL) 1340
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -135437.0 ( -103.15 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3A-query.scw
PDB file :
Tito_Scwrl_1Z3A.pdb
: