Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYREITAVEHDRFVSESNQTNLLQS-SNWP-KVKDNWGSQLLGFFDGETQ--IASA-SILIKSL-PLGFSMLYIPRGPIMDYSNLDIVTKVLKDLKAFGKKQRALFIKCDPLIYLKMVNAKDFENSPDEKEGLIAIDHLQRAGADW-TGRTTDLAHTIQPRFQANLYANQFGLDKMSKKTRQAIRTSKNKGVDIQFGSHELLEDFAELMKKTEDRKGINLRGIDYYQKLLDTYPNNSYITMAS-LDVAKRLEK-IEKECQIAQSERIKSLELNREKKVKQHQGTIDRLNKEIDFLKEAQKAYDRDIIPLAATLTLEFGNTSENIYAGMDDYFKSYSAPIYTWFETAQRAFERGNIWQNMGGIENDLSGGLYHFKSKFEPIIEEFIGEFNIPVNRLLYKASNYVYALRKKRNS |
| 4G3A Chain:A ((5-231)) | --------------KPSDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPW------------LTGSHFKIAQKSLEAFSELIKRLGSDFNA-----YTATVLPHVIDRLGDSRDTVR--EKAQLLLRDLMEHRVLP-PQALIDKLATSCFKHKN--AKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLG--DPTVNVREAAIQTLVEIYKHVGDRLRPDLRRMDDVPASKLAMLEQKFDQVKLE--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6602 for 1636 contacts (4.0/contact) +
2D Compatibility (PS) -22808 + (NN) -5434 + (LL) 12784
1D Compatibility (HY) -11200 + (ID) 1650
Total energy: -21706.0 ( -13.27 by residue)
QMean score : 0.319
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