Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLVATDMDGTFLDENGTY-DKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFADFRDQMAFIAENGSAAVLFNRLAYEQHLSREQYLDIIDHLSKSPYMENNEYVLSGKDGAYILSDANPDYIEFITHYYDNLQKVSHFEDVDDIIFKVTANFTEETVRQAEEWVNQAI-P-YTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD |
| 3L7Y Chain:A ((36-300)) | SVKVIATDMDGTFLNSKGSYDHNRF-QRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYP--QAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126022 for 2230 contacts (-56.5/contact) +
2D Compatibility (PS) -28146 + (NN) -10383 + (LL) 488
1D Compatibility (HY) -18800 + (ID) 3500
Total energy: -186363.0 ( -83.57 by residue)
QMean score : 0.528
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