Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAPKLVPL-LRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSID-APPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
1I8D Chain:A ((1-206))
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM------------
General information:
TITO was launched using:
RESULT:
Template:
1I8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94164 for 1558 contacts (-60.4/contact) +
2D Compatibility (PS) -21219 + (NN) 1755 + (LL) 676
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -128452.0 ( -82.45 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1I8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I8D-query.scw
PDB file :
Tito_Scwrl_1I8D.pdb
: