Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFAD-------KAEIELIEVKDLPL-FNKPAD------KN-----VPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGIYPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
1T0I Chain:A ((1-150))
MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTPQYNWGYPAALKNAIDRLYH---EWHGKPALVVSYG-GH-GGSKCNDQLQEVLH--GLKMNVIGGVAVKIPVGTIPLPEDIVPQLSVHNEEILQLLASCI---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79267 for 988 contacts (-80.2/contact) +
2D Compatibility (PS) -14620 + (NN) -8477 + (LL) 1964
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -110250.0 ( -111.59 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_1T0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0I-query.scw
PDB file :
Tito_Scwrl_1T0I.pdb
: