Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLHLDYEAYEIIVVDDGSSDN------TSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIV-----------------------KENGGKGDALNMGINAA---NYDYFLCLDADSMLQVDSLS----QIS-KSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVGGYDTQTLGEDMELVMKLHFFCRNNNIPYRICYETDAVCWSQAPTNLGDLRKQRRR |
| 2ZU9 Chain:A ((46-280)) | ------------------------------------------------IYDLLGKMAVIVPMKNEKL---HLVDGVLKAIPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLT------------------------HSKIIMIHQKDPGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDAD-NYIPGAVNEYVKDYAAGFLMSESEYTMVRLHWR---------------------VSEITN-HYLN-LLVSEHTAFETTIMVTGNAGEHAMTMKLAEIL-PFSTGY-SIEPYEIVYILERFGKWENVEEFKDVFDQGIEIFQIETLNPHFHEDKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92473 for 1340 contacts (-69.0/contact) +
2D Compatibility (PS) -19292 + (NN) -5115 + (LL) 9576
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -115504.0 ( -86.20 by residue)
QMean score : 0.369
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