Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MQQYFVNGEAGAYVTIEDKDTIKHMFNVMRLTEDDQVVLVFDDAIKRLAKVVDSSAHRFQILEELDNNVEMPVQVTIASGFPKGDKLDFVTQKATELGAAAIWGFPADWSVVKWDGKKLAKKEDKLAKIALGAAEQSKRNRLPQVRLFEKKADFQAELAGFDKIFIAYEESAKEGELSALAQNLQTVKAGDKLLFIFGPEGGISPKEIAAFEEVGAIKVGLGPRIMRTETAPLYALSVISYSAELL |
| 2QMM Chain:A ((3-197)) | AVRGFLIVGNKAFTQPFSLNDL---------------------PGAGRMDVLCRCTSQALFISHGIRRDVEVYLLL-----LGPPSPPKSILIKGDEV-------------------RRMSPDERNVAGHIKKALAVECGKSWKKVH-----SGVYVSRKGLEELIEELSEKYSIIYLKEDGVDISNAQLPPNPLFVIGDHEGLTEEQEKVVERYAALKLSLSPLSLLAEQCVVIAHHHLDRLQF-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31623 for 1619 contacts (-19.5/contact) +
2D Compatibility (PS) -20212 + (NN) -1521 + (LL) 4264
1D Compatibility (HY) -10000 + (ID) 1300
Total energy: -60392.0 ( -37.30 by residue)
QMean score : 0.326
|
|
|