Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MSNKVQERRERKIKEAIKAKNWDEVT---RLLQQEQSNAERRDRYHNRRIK--DETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4NNB Chain:A ((4-527)) | TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGH--AQPIAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGD----LLWEHER--------QHHYLPPALIEAIEKES-------PALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLGVVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGLGLDGIRVGLEDGLTVNDARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -750 for 776 contacts (-1.0/contact) +
2D Compatibility (PS) -13674 + (NN) -1690 + (LL) 1528
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -23386.0 ( -30.14 by residue)
QMean score : 0.261
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