Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRNPFKDKYYSHDRRALNMLALRVPGLAFILMIYIASIVLQFVSGGWSILLLYAFTILIAIFALLHWHSYRWVKKRVILYFAVQGLITFALANLMTGFFILVIIGLYAFLIGQIIGMADRRRTFLILYLLLLLVINSAYHLHKGEVLHFIVIAAPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQNERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEIIQQSMKRVKSTIADARSAIDDLRSKSEEIGV---LKERITSLMDHFIESTGMACLLDYRLHQVLDVRTAENCYYIIGECMTNAAKHAEAK-TIWISIWDDEKGRLHLTVKDNGKGFDVEKGK-----------KKRGHYGL---LGIQERVRAINGQFNIKSTKLKGTQIEITVPIQGEMQDE
4FPP Chain:A ((43-247))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDFAAMLAARLCHDFISPASAIVSGLDLLEDPSAQDMRDDAMNLIASSARKLADLLQFTRVAFGA-S-ASAENFDSRELEKLAQGVFAHVRPTLD----WQIE--PQAMN---KPSSRAVLNIAQIAASALPAGGVATVKGVAAD-GRFSIIADAKG--PRARLRPEVLAGLKGEPLAEGLGGPWVQAAYLNALVRAAGGQIAVEIGE-DRASIAAWVPA-------


General information:
TITO was launched using:
RESULT:

Template: 4FPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 790 -69728 -88.26 -372.87
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -88.26
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_4FPP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FPP-query.scw
PDB file : Tito_Scwrl_4FPP.pdb: