Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPSLYNPLAIASKPFPAIYSEKILIFTIFSAFAEFERDMIVERTQEGKMLAKQNPDFREGRPKKFTKQQINHALTLLE-NHSYKQVEDMTGISVSTLVRAKKKKAAEAING
2LVS Chain:A ((59-100))---------------------------------------------------------------RRLTEEELATIRELYLKGATVYEIARQLGRPESTIYYALKKL-------


General information:
TITO was launched using:
RESULT:

Template: 2LVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 105 -9057 -86.26 -220.90
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -86.26
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.684

(partial model without unconserved sides chains):
PDB file : Tito_2LVS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LVS-query.scw
PDB file : Tito_Scwrl_2LVS.pdb: