Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTLIILTVLLLSVLTAACSSSSGNQNSKEHKVAVTHDLGK-TNVPEHPKRVVVLELGFIDTLLDLGITPVGVADDNKAKQLINKDVLKKIDGYTSVGTRSQPSMEKIASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNL-N-ADYQDTIDASLTIAKAVGKEKEMEKKLTAHEEKLSETKQKISANSQSVLLIGNTNDTIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNMKMTLEQLLKTDPDVIILMTGKTD-DLDADGKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSLR-RSVDGANAILDELQKEMPAAKK
3TEF Chain:A ((51-329))-------------------------------ETVTIEHRLGKTT-LEQKPQRVVVIGVGALDAIDSFGIEPVAVSKFDGTPDYLAK-Y--KSDKYPSAGSLFEPDFETIYTQKPDLIVIGPRA-SKSYDELSKIAPTIVFAAEADQGYWESTQQQWRNLGKVFAIEPAVEAKIEQVDAQFKSIMQYNQQHKSDAMLVMSSGGNLTTFGANSRFSSVYKDFGFSETVPVSKE----S---SHGDLISFEYIREHNPKTLLVVDRDKVVTKGETNIRQTFENDLVKATTAYKNGHIAYLDVNAWYIAISGVKATEQMVADMKAS------


General information:
TITO was launched using:
RESULT:

Template: 3TEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1528 -112301 -73.50 -409.86
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -73.50
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_3TEF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TEF-query.scw
PDB file : Tito_Scwrl_3TEF.pdb: