Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGAY---VTVQGGRTSLVAGTVPEHDDVLLSTERLCVV-----SDVDTVERRIEIGAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVVGLDVALPDGTVLRRHSRVRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEGIAALELIDGRAA---ALTREHLGVRPPVEADWLLLVELAADH---------------DQTDRLADLLGGARMCGEPAVGVDAAAQQRLWRTRESLAEVLGVYGPP---LKFDVSLPLSAISGFARDAVALVHRHVP-DSPEALPLLFGHIGEGNLHLNV----------LRCPPDREPALYAKMMGLIAECG--GNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAA-VLFD |
1W1O Chain:A ((40-534)) | ------ALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAP-GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYL-YLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCS-----KQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164295 for 3546 contacts (-46.3/contact) +
2D Compatibility (PS) -46540 + (NN) -19874 + (LL) 1208
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -245351.0 ( -69.19 by residue)
QMean score : 0.325
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