Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSSDWLPTA-CILCECNCGIVVQVDDRRLARIRG-------DKAHPGSAGYTCNKALRLDHYQNNRARLSSPMRRRA-------------------------------------DGTYEEIDWDTAIVEIAEGFKQIRDTHGGDKIFYYGGGGQGNHLGGAYSGAFLKALGSRYRSNALAQEKTGEAWVDFQLYGG----HTRGEFENAEVSVFVGKNPWMSQSFPRARVVLNEIAKDPGRSMIVIDPVVTDTAKMADFHLRVQPGCDAWCLAALAAVLVQE------NLCNEAFLAAHVHGVDTVR-----------------------------------------------------------------------------------------------------------------------------------------------------------AALQEVPVADYAQRCGVDEELLRAAARRIGTA-----ASVSVFEDLGIQQAPNSTVCSYLNKLLWILTGNFAKKGGQHLHSSFAP-LFSQ-VSG--------R------------------------TPVTG-AP------------------IIAGLIPGN-----------------------VVPEEILT-----------EHPDRFRAMIVERGNPAHSLADSAA-CRAA-------------------------------FQALELMVVVDVAMTETARLAHYVLPAASQFEKPEATFFNFEFPRNGFQLRRPLFPPLPGTLPEPEIWARLVRALGVVDEA--D-----------L---RPLR-----EAAAQGR----------------QAY---TEAFLAA---A----------A--T---NPTVAKLTA---------YVLYETLGPTLPDGLAGAAALWGLAQKTAMAYPDAVRRA-GHADG---------NALFDAILE---------RPSG-----VTFTV-HNYEDDFALISHPDHKIALEIPEMLA--EIRSLTQTPSR--------------LTTPQLPIVLSVGERRAYTANDIFRD-PSWRK-RDANGALRVSVEDAQALGLADGCLARITTAAGSAEATVEVTETMLAGHAALPNGFGLDYTGDD-GRTVVAGVAPNALTSTRWRDPYAGTPWH----------------KHVPAAIRRADAESPIWYPKWAILPARGVLA |
| 1Q16 Chain:A ((43-1234)) | ---DKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPP--ASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDA-H-FFTEV-RYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKD-DMNTSD--MHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTA-IDAAEMILTL--APETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKW-GIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRI-TPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKM--KNIDWL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244728 for 6478 contacts (-37.8/contact) +
2D Compatibility (PS) -78129 + (NN) -23805 + (LL) 2776
1D Compatibility (HY) -9200 + (ID) 5850
Total energy: -358936.0 ( -55.41 by residue)
QMean score : 0.321
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