Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPASTSSTGGHALATLLGNHGVEVVVADSIADVEAAARPDSLLLVAQTQYL---VDNALLDRLAKAPG-DLLLVAPTSRTRTALTPQLRIAAASPFNSQPNCTLREANRAGSVQWGPSDTYQATGDLVLTSCYGGALVRFRAEGRTITVVGSSNFMTNGGLLPAGNAALAMNLA-GNRPRLVWYAPDHIEGEMSSPSSLSDLIPENVHWTIWQLWLVVLLVALWKGRRIGPLVAEELPVVIRASETVEGRGRLYRSRRARDRAADALRTATLQRLRPRLGVGAGAPAPAVVTTIAQRSKADPPFVAYHLFGPAPATDNDLLQLARALDDIERQVTHS- |
| 4XD9 Chain:A ((19-254)) | ---KEPQLIEGAKRVLLLHGSKCPTPLHTVLKVFHSLTTPHSVLFHKKNENIHPFESTESLEFLANKNDCGMVIFGSSNKKRP------------------------------------------NCLTIARIFDS---------KVLDMAELLLLPDANGEGIPEMNRLSMHVAIGLRPLMLFSGS-----AWDDTTS------------TTHTMLKSMLVDLFKGETSDKIDVEGLQYALMVGAEEPTAG---------LAPIIHLRWYKIVTKR---------------------SGHKLPRVELEEIG--PKLDFKVGRIQEAPRDVMKEAMKQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87606 for 1626 contacts (-53.9/contact) +
2D Compatibility (PS) -24761 + (NN) -8935 + (LL) 6196
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -125456.0 ( -77.16 by residue)
QMean score : 0.288
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